Codex review of the PR2 diff caught doc/comment sites doc-sync does not gate
(core-data-structures prose) and a latent test-helper race:
- docs/core-data-structures/persistence.md + bash.md, sqlite README, and two
source comments (coordinator.ts, jsonl.spec.ts) still listed the removed
has/delete/get/list methods — updated to the surviving four-method
persistence surface and the get/list-free bash seam.
- doneFor(ctx, id) attached its onTaskDone listener lazily, after the task
could already have closed (e.g. `true`), so it could miss the completion and
hang. Replaced with trackCompletions(ctx): one eagerly-installed listener
(mounted in setup() before any task starts) records every completion, and
doneFor resolves immediately for an already-finished task or on completion
otherwise. Race-free, and there is no get-by-id seam left to poll instead.
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