deepseek-harness/docs/core-data-structures/persistence.md

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# Session Persistence
English | [中文](persistence.zh.md)
The **durability seam** for the event log. [session.md](session.md) describes the in-memory `Session` — the append-only `SessionEvent` log that is the source of truth. This page describes how that log is made durable: the abstract `SessionPersistence` service, its backends, the flush checkpoint, crash recovery, and the metadata header that travels alongside the log. The event vocabulary the log carries is enumerated, member by member, in the generated [persistence log event catalog](../persistence-catalog.md).
The seam is a textbook [capability seam](../../.agents/notes/implemented/architecture/2026-06-13-capability-seams.md): one abstract service ([dsh-session-persistence](../../packages/session-persistence/session-persistence), `ctx.sessionPersistence`) defining locate/create/append, crash-repairing load, non-mutating inspect, and lightweight list/snapshot observation over the existing `SessionEvent` — **no parallel persisted type** — and two interchangeable backends that pass the same `runPersistenceContract` suite. See the [session-persistence Agent Note](../../.agents/notes/implemented/architecture/2026-06-14-session-persistence.md).
## The flush checkpoint
`session/event` is a *synchronous* notification; persistence plugins copy the event into a per-session controller and start an eager write without blocking the producer. Concurrent events share the current batch, and events admitted during that write trigger a follow-up batch. `session/flush` waits until no current or pending batch remains, so the loop still uses it as the ordering and error-observation checkpoint before claiming the next ordinary turn. A rejected eager write retains its events; an explicit flush retries them and reports failure through `agent/error` and the logger, never as a session event past the closed turn. Disposal performs the same final drain.
## Crash recovery preserves an interrupted turn
A backend that reloads a log crashed mid-turn finds an open `turn/start` with no `turn/end`. It does **not** truncate — a single turn can be huge in a long-horizon task (many steps, large tool output), and those events were durably appended before the crash. Instead it closes the orphaned turn with a synthetic `turn/end { reason: { kind: 'interrupted' } }`, keeping the interrupted execution balanced without changing any standalone events before or after it. `interrupted` is the one `TurnEndReason` no loop emits (see [session.md](session.md#why-a-turn-ended-turnendreasonmap)).
Repair applies only to cold sessions. For a live id, `SessionPersistence.load(id)` snapshots the in-memory log, waits until that snapshot is durable, and returns it with the stored header only when balanced; an open live turn rejects rather than receiving synthetic interruption boundaries. A coordinator-backed cold load reserves the id across backend reads and repair writes, so concurrent publication of a same-id live session rejects and rolls back. HMR also adopts a live prefix without closing its active turn.
`SessionPersistence.inspect(id)` is the observer counterpart to recovery: it returns a detached valid stored prefix without truncating a torn record, adding interruption closers, or publishing write state. Same-id serialization keeps it coherent with backend writes. Derived read models use `inspect`, never `load`, so observing a checkpointed open turn cannot mutate the log if live ownership begins concurrently.
## `SessionLocation` — optional per-session artifact target
`SessionPersistence.locate(meta)` synchronously resolves a backend-owned independent artifact without reading, creating, or flushing it. JSONL returns the absolute transcript path inside its project/session directory; SQLite returns `undefined` because sessions share one database. A returned path can therefore name a file that does not yet exist or lacks the current unflushed turn; it is a location hint, not authorization or a freshness guarantee.
```ts type-equiv
/**
* A backend-resolved, per-session local artifact location. The path is an
* absolute target path and can name an artifact that has not materialized yet.
* Consumers must treat it as a location hint, never as an authorization token.
*/
interface SessionLocation {
/** Backend-specific artifact kind, for example `jsonl`. */
readonly kind: string
/** Absolute path to this session's backend-owned artifact. */
readonly path: string
}
```
## `SessionHeader` — metadata beside the log
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Per-session metadata travels **separately** from the event log: format version, cwd, lineage, and the seed boundary are storage concerns, not conversation events, so they stay out of `SessionEventMap` and never reach `deriveMessages()`. The header is attached to a `Session` via `session.header`.
Source: [`packages/core/session/src/types.ts`](../../packages/core/session/src/types.ts)
```ts type-equiv
/**
* Immutable validated storage metadata, kept outside the conversation event log.
*/
interface SessionHeader {
fix review findings: bump session format version + restore late turn-end warn Codex review of the trace-event fold found two merge-blockers. Blocker #1 — format version. Folding usage onto assistant/message and removing the standalone usage/error events changed the persisted SessionEventMap shape, which per the AGENTS.md "bump the version and reject — don't migrate" policy requires a backend to reject any non-current log. Centralize the version in an exported SESSION_FORMAT_VERSION constant (dsh-session), read by both write sites (Session constructor default, SessionStore.prepare header) and the coordinator's load-time assertVersion check. The constant is pinned at 0: while unreleased the on-disk format is unstable/pre-release, so breaking shape churn is absorbed at v0 (no monotonic bump until the first tagged release) and any non-0 log is rejected on load — no migration. Update every test/fixture/doc that stamps a currently-written header to the constant, bump the ACP snapshot fixture + golden headers to v0, and keep the version-rejection test meaningful by switching its bad value to a clearly non-current 99. AGENTS.md documents both the monotonic (SQLite SCHEMA_VERSION) and pinned-0 (session log) pre-release stances. Blocker #2 — restore the late turn-end warn. failTurn now sets the error reason only while the turn is still open; once turn/end is appended (a throwing agent/turn-end listener after closeTurn) the reason can no longer reach the durable log, so the late throw is logged via ctx.logger.warn instead of vanishing into a futile post-close assignment. A regression test asserts the warn fires. Also guard the normal-step assistant/message append with the same content-or-usage condition as the max-tokens branch (a content-less, usage-less step records no trace-only row), with a covering test.
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/**
* On-disk format version, stamped from {@link SESSION_FORMAT_VERSION} when the
* session is created. A persistence backend rejects any other version on load
* (no migration — see the constant).
*/
readonly version: number
/** The session's id (mirrors the {@link Session}'s id). */
readonly id: SessionId
/** Non-negative safe-integer Unix epoch milliseconds when the session was created. */
readonly createdAt: number
/** Absolute working directory the session was created in (if any). */
readonly cwd?: string
/** The session this one was forked from (seed lineage), if any. */
readonly parentSession?: SessionId
Persist the seed boundary so fork-child replay routes correctly A fork subagent seeds its child session with a prefix of the parent's log, and that seed becomes the child's persisted log — so a fork child's .jsonl begins with the PARENT's events, including the parent's assistant/chunk events. The snapshot replay harness derived a child's script from its whole log, which would replay the parent's recorded responses as the child's model calls. Spawn-only scenarios never hit it, but a fork snapshot would mis-route silently. Record the seed boundary and skip the inherited prefix at replay: - SessionHeader gains an optional `seedLength` (how many leading events were inherited via a seed), threaded through CreateSessionOptions/CreateAgentOptions meta and stamped by the fork backend (= seeded-prefix length; absent for spawn). It is EXPLICIT, never inferred from seed.length: a resume seeds the whole stored log, so the resume path passes the persisted boundary back. - Both persistence backends round-trip it: JSONL header line, SQLite seed_length column. The SQLite table change bumps SCHEMA_VERSION 2->3; per the pre-release stance the backend rejects an older user_version on open with NO migration. - llm-replay's parseSessionHeader reads seedLength and loadSessionScripts derives a child script from events AFTER the boundary. seedLength is 0 for spawn, so spawn replay is byte-for-byte unchanged. Closes the routing-correctness gap the per-session snapshot replay RFC under- stated; a recorded fork scenario remains a future addition but now derives correctly. RFC: docs/rfc/implemented/testing/2026-06-22-fork-child-replay-seed-boundary.md. Regression coverage: a fork child fixture whose seeded prefix carries a parent chunk (derived script must exclude it, proven red without the slice); a seedLength persistence round-trip through the shared coordinator contract (both backends); the fork backend stamping it; resume preserving it from the persisted header.
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/**
* How many leading events were inherited through a seed. Persisting this
* boundary lets resume and replay distinguish parent history from child work.
Persist the seed boundary so fork-child replay routes correctly A fork subagent seeds its child session with a prefix of the parent's log, and that seed becomes the child's persisted log — so a fork child's .jsonl begins with the PARENT's events, including the parent's assistant/chunk events. The snapshot replay harness derived a child's script from its whole log, which would replay the parent's recorded responses as the child's model calls. Spawn-only scenarios never hit it, but a fork snapshot would mis-route silently. Record the seed boundary and skip the inherited prefix at replay: - SessionHeader gains an optional `seedLength` (how many leading events were inherited via a seed), threaded through CreateSessionOptions/CreateAgentOptions meta and stamped by the fork backend (= seeded-prefix length; absent for spawn). It is EXPLICIT, never inferred from seed.length: a resume seeds the whole stored log, so the resume path passes the persisted boundary back. - Both persistence backends round-trip it: JSONL header line, SQLite seed_length column. The SQLite table change bumps SCHEMA_VERSION 2->3; per the pre-release stance the backend rejects an older user_version on open with NO migration. - llm-replay's parseSessionHeader reads seedLength and loadSessionScripts derives a child script from events AFTER the boundary. seedLength is 0 for spawn, so spawn replay is byte-for-byte unchanged. Closes the routing-correctness gap the per-session snapshot replay RFC under- stated; a recorded fork scenario remains a future addition but now derives correctly. RFC: docs/rfc/implemented/testing/2026-06-22-fork-child-replay-seed-boundary.md. Regression coverage: a fork child fixture whose seeded prefix carries a parent chunk (derived script must exclude it, proven red without the slice); a seedLength persistence round-trip through the shared coordinator contract (both backends); the fork backend stamping it; resume preserving it from the persisted header.
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*/
readonly seedLength?: number
/**
* Delegation depth: absent (zero) for a top-level session, parent depth + 1
* for a subagent child. Persisted so a recursion budget survives restart and
* resume — a runtime-only depth would reset a resumed child to top-level.
*/
readonly delegationDepth?: number
}
```
## `CreateSessionOptions` — seeding and metadata
subagent: seed inherited policy events at creation The parent implementation introduced sandboxMode and approvalPolicy as generic SessionHeader fields, then propagated those fields through both persistence backends, session-query indexes, collision checks, policy-specific seed-boundary folds, catalogs, and a broad test matrix. That storage plane is unnecessary: Session already accepts a validated constructor seed, and persistence captures that seed when the session is announced before committing its first batch. Capture each parent override synchronously at delegation, append source-tagged sandbox/mode and approval/policy records after the optional fork prefix, and create the child with that combined seed. Keeping header.seedLength at the original fork-prefix length preserves lineage while ordinary last-event-wins folds make the inherited records outrank stale parent history and remain subordinate to later child switches. Unswitched parents still stamp nothing, so children continue to follow deployment defaults. Remove the generic header fields and every persistence/query/schema branch built around them. Collapse the inheritance suite from ten leaking scenarios to four owned-context cases covering real filesystem confinement, stale fork precedence, delegation-time capture, and the no-override path. The assembled headless snapshot now asserts the persisted inheritance event directly. This keeps the security behavior while restoring policy ownership to the existing event log and deleting the speculative durability machinery that the original tests did not exercise.
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Creating a `Session` through the store takes a `seed` (replay/fork an existing event log) and `meta` (the storage-level fields the store folds into a `SessionHeader`). The store fills in `version`/`id` and defaults `createdAt`; the caller supplies the validated absolute `cwd`, the `parentSession` lineage, the `seedLength` seed boundary, the `delegationDepth`, and — only when reconstructing a persisted session — the original `createdAt` to preserve it.
```ts type-equiv
/**
* Options for creating a {@link Session} via the store. `seed` replays/forks
* an existing event log; `meta` carries the caller-supplied storage fields the
* store folds into a {@link SessionHeader}.
*/
interface CreateSessionOptions {
/** Events to seed the new session with (replay/fork). */
readonly seed?: readonly SessionEvent[]
/**
* Storage metadata read once before publication. `seedLength` is explicit
* because a resumed seed contains the full stored log, not only its inherited prefix.
*/
readonly meta?: {
readonly cwd?: string
readonly parentSession?: SessionId
readonly createdAt?: number
readonly seedLength?: number
readonly delegationDepth?: number
}
}
```
Replay/fork is therefore `ctx.sessions.create(id, { seed: seedEvents })`; resuming a *persisted* session into a live agent is `ctx.agents.resume({ resumeSessionId })`.
## Lightweight source revisions
Consumers of derived state compare a cheap opaque revision before loading a full event log. The persistence backend owns its representation and changes it transactionally with append or mutating load repair; callers compare it only for equality.
```ts type-equiv
Merge remote-tracking branch 'origin/master' into session-query-search # Conflicts: # .agents/notes/implemented/feature/2026-07-10-session-query-service.md # .agents/notes/implemented/feature/2026-07-10-sqlite-session-query-provider.md # .agents/notes/proposed/feature/2026-07-10-sqlite-session-query-provider.md # docs/architecture.md # docs/capability-seams.md # docs/config-catalog.md # docs/cordis-catalog/services.md # docs/core-data-structures/core.md # docs/core-data-structures/persistence.md # docs/core-data-structures/session-query.md # docs/module-graph.md # docs/rfc/INDEX.md # packages/README.md # packages/cordis/tool-cordis/src/api-catalog.ts # packages/hooks/hooks-claude/tests/coverage.spec.ts # packages/session-persistence/session-persistence-jsonl/src/index.ts # packages/session-persistence/session-persistence-jsonl/tests/jsonl.spec.ts # packages/session-persistence/session-persistence-sqlite/README.md # packages/session-persistence/session-persistence-sqlite/src/index.ts # packages/session-persistence/session-persistence-sqlite/src/schema.ts # packages/session-persistence/session-persistence-sqlite/tests/sqlite.spec.ts # packages/session-persistence/session-persistence/README.md # packages/session-persistence/session-persistence/package.json # packages/session-query/README.md # packages/session-query/session-query/README.md # packages/session-query/session-query/package.json # packages/session-query/session-query/src/config.ts # packages/session-query/session-query/src/index.ts # packages/session-query/session-query/src/types.ts # pnpm-lock.yaml # scripts/gen-doc-graphs.ts # scripts/type-equiv.manifest.json # tsconfig.host.json # tsconfig.json
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/**
* Backend-owned token that identifies both one storage source and one revision
* of a persisted session log.
*/
type SessionPersistenceRevision = Branded<'SessionPersistenceRevision'>
```
```ts type-equiv
Merge remote-tracking branch 'origin/master' into session-query-search # Conflicts: # .agents/notes/implemented/feature/2026-07-10-session-query-service.md # .agents/notes/implemented/feature/2026-07-10-sqlite-session-query-provider.md # .agents/notes/proposed/feature/2026-07-10-sqlite-session-query-provider.md # docs/architecture.md # docs/capability-seams.md # docs/config-catalog.md # docs/cordis-catalog/services.md # docs/core-data-structures/core.md # docs/core-data-structures/persistence.md # docs/core-data-structures/session-query.md # docs/module-graph.md # docs/rfc/INDEX.md # packages/README.md # packages/cordis/tool-cordis/src/api-catalog.ts # packages/hooks/hooks-claude/tests/coverage.spec.ts # packages/session-persistence/session-persistence-jsonl/src/index.ts # packages/session-persistence/session-persistence-jsonl/tests/jsonl.spec.ts # packages/session-persistence/session-persistence-sqlite/README.md # packages/session-persistence/session-persistence-sqlite/src/index.ts # packages/session-persistence/session-persistence-sqlite/src/schema.ts # packages/session-persistence/session-persistence-sqlite/tests/sqlite.spec.ts # packages/session-persistence/session-persistence/README.md # packages/session-persistence/session-persistence/package.json # packages/session-query/README.md # packages/session-query/session-query/README.md # packages/session-query/session-query/package.json # packages/session-query/session-query/src/config.ts # packages/session-query/session-query/src/index.ts # packages/session-query/session-query/src/types.ts # pnpm-lock.yaml # scripts/gen-doc-graphs.ts # scripts/type-equiv.manifest.json # tsconfig.host.json # tsconfig.json
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/** Lightweight immutable source identity returned without loading a full log. */
interface SessionPersistenceSnapshot {
/** Detached metadata for one materialized session. */
header: SessionHeader
Merge remote-tracking branch 'origin/master' into session-query-search # Conflicts: # .agents/notes/implemented/feature/2026-07-10-session-query-service.md # .agents/notes/implemented/feature/2026-07-10-sqlite-session-query-provider.md # .agents/notes/proposed/feature/2026-07-10-sqlite-session-query-provider.md # docs/architecture.md # docs/capability-seams.md # docs/config-catalog.md # docs/cordis-catalog/services.md # docs/core-data-structures/core.md # docs/core-data-structures/persistence.md # docs/core-data-structures/session-query.md # docs/module-graph.md # docs/rfc/INDEX.md # packages/README.md # packages/cordis/tool-cordis/src/api-catalog.ts # packages/hooks/hooks-claude/tests/coverage.spec.ts # packages/session-persistence/session-persistence-jsonl/src/index.ts # packages/session-persistence/session-persistence-jsonl/tests/jsonl.spec.ts # packages/session-persistence/session-persistence-sqlite/README.md # packages/session-persistence/session-persistence-sqlite/src/index.ts # packages/session-persistence/session-persistence-sqlite/src/schema.ts # packages/session-persistence/session-persistence-sqlite/tests/sqlite.spec.ts # packages/session-persistence/session-persistence/README.md # packages/session-persistence/session-persistence/package.json # packages/session-query/README.md # packages/session-query/session-query/README.md # packages/session-query/session-query/package.json # packages/session-query/session-query/src/config.ts # packages/session-query/session-query/src/index.ts # packages/session-query/session-query/src/types.ts # pnpm-lock.yaml # scripts/gen-doc-graphs.ts # scripts/type-equiv.manifest.json # tsconfig.host.json # tsconfig.json
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/** Opaque source-qualified token that changes whenever this stored log changes. */
revision: SessionPersistenceRevision
}
```
## The backends
Both implement the same abstract `SessionPersistence` (locate/create/append/load/inspect/list/listSnapshots over `SessionEvent`, with optional cancellation on observation methods) and pass `runPersistenceContract`, proving the seam is genuinely backend-agnostic:
- **[dsh-session-persistence-jsonl](../../packages/session-persistence/session-persistence-jsonl)** — an append-only logical JSONL log per session, stored as checksummed concatenated Zstandard frames by default or raw lines by configuration, with crash-safe atomic writes, interrupted-turn recovery, and a read/replay path.
- **[dsh-session-persistence-sqlite](../../packages/session-persistence/session-persistence-sqlite)** — `node:sqlite`, one row per `SessionEvent`. The row shape `(session_id, seq, type, time, data, source_event_seqs, surface_op)` maps 1:1 onto the event, including optional surface metadata, so there is no parallel persisted schema to keep in sync.